De novo annotation of putative circRNA-encoded peptides

For each peptide encoded by BSJ-spanning ORF, we provide detailed information on its sequence, predicted secondary and tertiary structure, and potential biological function.

 

circORF basic information

Tips: circORF refers to an Open Reading Frame spanning the backsplice junction of a circRNA.

cORF start cORF end cORF length (aa) phastCons cORF amino acid sequence

Summary of circRNA-encoded peptide characteristics

Tips: signal cleavage site prediction (SignalP), transmembrane domain prediction (TMHMM and Phobius), and N-terminal presequences prediction (TargetP).

SignalP5.0b: cleavage site present? TMHMM1.1: transmembrane domain present? Phobius1.01: transmembrane domain present? TargetP2.0: N-terminal presequences TargetP2.0: likelihood

DeepLoc location prediction of circRNA-encoded peptide




I-TASSER protein structure prediction of circRNA-encoded peptides